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AST / ALT & Cholestatic Labs

Every liver panel answers two questions. One: is the injury in the cells (AST and ALT leak out) or in the bile ducts (alkaline phosphataseALP: made by liver canaliculi, osteoblasts, placenta, and intestine. Context determines origin → GGT is the referee. climbs)? Two: when alkaline phosphatase is high, did it come from liver or bone? GGTGGT: canalicular enzyme induced by alcohol and obstructive cholestasis. Bone osteoblasts cannot produce GGT → high GGT alongside ALP = hepatobiliary, not bone. settles it, because bone makes no GGT. Read the panel in that order and the diagnosis falls out.

Commit: A 48-year-old teacher has weeks of fatigue and a vague itch. Alkaline phosphatase is nearly twice the upper limit. AST and ALT are normal. No bone pain, no pregnancy. Alkaline phosphatase can come from liver or bone, and you need to know which. Which single lab tells you the source?
Repeat alkaline phosphatase weekly until it behaves
Serum calcium alone because bones hoard calcium stories
Gamma-glutamyl transpeptidase (GGT)
Urinary bilirubin dipstick as first referee
Alkaline phosphatase does not tell you where it came from. Bone osteoblasts make it, and so do the bile canaliculi in the liver. GGT is the tiebreaker: the liver makes GGT, bone does not. So if GGT is also high, the alkaline phosphatase is hepatobiliary. If GGT is normal, the source is bone. Calcium does not localize the enzyme. Repeating the same alkaline phosphatase adds no new information. Rule: isolated, unexplained alkaline phosphatase elevation → check GGT first to split liver from bone.

Lab Lineup ER

Five patients waiting. Each has a hidden lab panel. Tap a lab to reveal it. Make the call with as few reveals as possible.

ER Queue · 5 Patients

Each lab card shows the value when tapped. Pick the diagnosis below each patient when ready. Score tracks how many reveals you used per case.

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From the Attending

Liver workup is a four-lab problem: AST / ALT / Alk Phos / GGT · add total + direct bilirubin and you've covered 90% of the differential. AST/ALT ratio > 2 with mild elevation = alcoholic (B6-dependent ALT drops). ALT > AST mild to moderate = NAFLD or chronic viral. Both > 1000 = acute viral, ischemic, acetaminophen. Alk Phos + GGT both up = cholestasis. Alk Phos up + GGT normal = bone source (Paget, fracture, growth). The lineup teaches by letting the pattern emerge one number at a time.

Ratios & Canalicular Labs

Flip between the two ratio patterns, then read the cholestasis lab panel below.

AST / ALT < 1
AST / ALT ≥ 1

ALT outruns AST

De Ritis ratioAST divided by ALT. Named after Fernando De Ritis who first described alcoholic liver disease patterns. >2:1 suggests alcoholic hepatitis; <1 suggests viral/NAFLD. below 1 means ALT is the bigger number.
Classic causesViral hepatitis and early fatty liver (NAFLD)
Still check alk phosBile-duct obstruction can shift enzymes too, so always read alkaline phosphatase alongside the ratio
Why ALT leadsCytosolic ALT leaks first in early hepatocyte injury, so ALT runs ahead of AST
TrapALT being high does not rule out bile-duct disease. Itch plus high alkaline phosphatase still means image the ducts.

AST catches ALT

AST climbs relative to ALT in alcohol, massive necrosis, advancing fibrosis, and from tissue outside the liver.
AlcoholAST tops ALT, ratio above 1.5, but AST stays under 400 IU/L. B6 depletion caps how high it can climb.
CirrhosisAs scar replaces hepatocytes, the ratio widens toward AST
Non-liver sourcesMassive necrosis, hepatocellular carcinoma, liver metastases, rhabdomyolysis, and MI all release AST
GGT clueGGT high while alkaline phosphatase stays normal points to chronic alcohol, not obstruction

The cholestasis lab pattern

When bile cannot drain (cholestasis), conjugated (direct) bilirubin backs up and alkaline phosphatase and GGT rise together.

ParameterBoard cheat sheet
Alkaline phosphatase Made by liver bile canaliculi AND bone, plus placenta and intestine. A high value alone cannot name its source. Infiltrative liver disease and bone tumors both raise it.
GGT Made in the bile canaliculi, not in bone. Rises fast with bile obstruction and with alcohol. A high GGT next to a high alkaline phosphatase confirms the liver is the source.
Indirect bilirubin Unconjugated, fat-soluble pigment from heme breakdown. Rises when red cells break down faster than the liver can conjugate the pigment (hemolysis).
Direct bilirubin Conjugated pigment. Spills back into the blood when bile cannot drain, as in obstruction or hepatocyte injury.
5 prime nucleotidase Older liver-specific marker. Like GGT, it confirms that a high alkaline phosphatase came from the liver, not bone.

Splitting bilirubin into direct and indirect separates obstruction (direct rises) from overproduction like hemolysis (indirect rises). Trapped bile salts also injure hepatocytes, which leaks some AST and ALT later.

Hepatocellular vs Cholestatic

Cover the table and recite each row first. Tap to reveal and check yourself.

tap to reveal
FeatureHepatocellularCholestatic
Lead enzymesAST and ALT highAlk phos and GGT high
AST / ALT ratioDrives the cause: over 2 alcohol, over 4 Wilson, under 1 viral or NAFLDNot the discriminator here, transaminases are only mildly up
GGTUsually normal or mildly upHigh, and confirms the alk phos is liver not bone
BilirubinVariable, follows hepatocyte injuryDirect (conjugated) dominant from backed-up bile
R-factor (ALT/ULN over alk-phos/ULN)Greater than 5Less than 2 (2 to 5 is mixed)
What to imageUsually none first, work up cause by history and serologiesUltrasound then MRCP for stone, stricture, or mass

Inside One Hepatocyte

Pick a state. Watch the two enzyme pools, the B6 cofactor, and the ratio move in real time. The picture is the answer.

De Ritis Engine · AST / ALT live model
AST lives in cytosol and mitochondria. ALT is mostly cytosolic and leans hard on vitamin B6. Change the injury and the ratio follows.
Hepatocyte enzyme compartments driving the AST to ALT ratio A single liver cell showing the cytosolic ALT pool and the mitochondrial AST pool leaking into the bloodstream as the selected injury changes. to blood ALT : cytosol (needs B6) AST : mitochondria + cytosol
AST22
ALT25
B6 cofactor (pyridoxal-5'-phosphate), ALT depends on it more than AST
fully stocked
AST / ALT = 0.88
1 2

Membrane intact. Both pools sit quiet. ALT edges ahead, so the ratio parks just under 1.

From the Attending

Why does alcohol flip the ratio? Two hits at once. One: alcohol poisons mitochondria, and AST is the only one of the pair stored there, so mitochondrial AST pours out and AST climbs. Two: chronic drinkers run low on B6 (pyridoxal-5'-phosphate), the cofactor both enzymes need, and ALT leans on it more, so ALT synthesis throttles and ALT falls. AST up plus ALT down pushes the ratio over 2, while AST still rarely tops 400. Mitochondrial AST out plus B6-starved ALT down equals ratio over 2.

KEEP GOING

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Gastrointestinal
Return to the GI hub.
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Pair enzymes today with tomorrow serology decoding.
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Cholestatic diseases that lean on these labs.
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Medically reviewed by Fatima Ali, DO and Kaitlyn Cocuzzo, MD · Last reviewed June 2026
Bone Wizardry is an independent educational resource for visual learning in the medical sciences. It is not affiliated with, endorsed by, or sponsored by any licensing or examination board, contains no real or recalled examination questions, and does not guarantee any educational or examination outcome.